Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935585.1_cds_XP_016481370.1_72708
CDS Infomation

[gene=LOC107802397] [db_xref=GeneID:107802397] [protein=U3 small nucleolar ribonucleoprotein protein MPP10 isoform X3] [protein_id=XP_016481370.1] [location=join(20693..21373,21541..21602,22463..22583,22721..22831,23145..23282,24455..24523,24649..24690,24850..24918,25369..25440,25531..25584,25687..25828,31849..31911,32004..32020)] [gbkey=CDS]
Sequence

ATGGCAACCACGGCGGACGACAGCCAAAGTGCTGACGGCGTTAAGGCTCTCCGGCGGCTC
AAATCCACTGACGCACCTCTCTATCTCTCAGCATCACCGGACCTTTCTGAAGCAGCTCGA
TTAGCCTCCAAGTACCTATACTCTTCTCTCAAACCCTACACCCCGAAGTCACCTTTCGCT
CAACTCTTGACGGATGGTTTTGATGCTGAGCAAATATGGCAGCAAATTGACTTCCAATCT
GAGCCCTTACTTTCCTCTCTCCGTCGCCAAATCAGACAATTTGAGAAGAATCCTGAGGAA
ATTTCAAAGCTTTTCAATTTAGTTGAAGAAAAGAAGAGGGACAAAGAGGAATTGGCAGTA
GAAGAAGGAGAAAGTGAGGACTTTAAGGATGTAGCTATGGATGATTTTGATGACGAGGAT
GATGTGGATGATGACGATGAAGAAGAAGAGGAGGATGATGATGATGAGGAGGGTGATGAT
GGTGAGAAGAGCGAAGACGGGGAGGAGGAGAATGGAGGGGTAAAAGGGGGACTGGAAGAT
AAGTTTTTCAAGGTAAACCAGTTGGAAGAGTATATGGAGGCTGATGAGGCAAGGGAATAT
GGCTTGAAGAAGAAGACTAAGAGGACAAGGAGCAAGGACGAAGAGGAGGAGGATGAAGAA
GCTGACGAGGACGAGGACGAGCTTGGATTTATGGGCCTCGACGATGATGAAGATGATGAA
AATGGAGGAACCGAAAGTGCTAGATATGAGGACTTCTTTGGTTCAAACAAGGGTATTGGA
CGGAAGAAAAATGTCAAATCATCTGATCTATCAGATGGCCTGGGAATGGATGATGACATG
AGTGATGATAATGATGACAATCAGAAGAAGAAAAGCCTTTCTACCCATGAAAAGGAGCTT
GTAAAACTCCGATCTACAATTGAGGAAATGGAGAAAGCAAACTTGGAAGAGAAGGCCTGG
ACTATGCAAGGAGAAGTAACTGCTGCAAGAAGGCCAAAGAATAGTGCATTGGAAGTTGAT
CTGGATTTCGAGCACAATGTGAGACCTGCCCCTGTAATTACTGAAGAGGTTACTGCATCA
CTTGAAGAACTAATTCAGAAACGTATTGTAGAGGGTCGGTTTGATGACGTTCAGAAGCCT
CCTAGCTTGCCATCCAGAGCACCGAGAGAAACAAAAGAATTGGATGACAATAAAAGCAAA
AAGGGCCTTGCCGAAATTTATGAGGAGGAATATGTCCAGAAAACTGGTCTTGTATCAACA
GCATTATCCTTCTCAGATGAGCAGAAGAAAGAGGCCACTTTGCTGTTTAAGAAACTGTGC
TTGAAGTTGGATGCTTTGTCTCATTTCCACTTCACTCCAAAACCGGTCATAGAAGATATG
TCTGTACAAGCAAATGTCCCAGCACTTGCAATGGAAGAGATTGCACCTGTGGCAGTCTCT
GATGCAGCTATGCTGGCTCCCGAGGAAGTATTTTCTGGCAAAGGAGATGTTAAAGAAGAA
ACAGAGTTGACACAAGCAGAGAGAAAAAGGAGGAGAGCAAAGAAGAAAAGGAAATTTAAA
GCTGAATCATCAAAAAGGACGGTCAAGGCGGCACCCCAAAATACATTGTCTGATGATGTT
GAGAGGAATGAGAAGTCATAA

Peptide Sequence

PEP ID

XP_016481370.1
PEP Infomation

PREDICTED: U3 small nucleolar ribonucleoprotein protein MPP10 isoform X3 [Nicotiana tabacum]
Sequence

MATTADDSQSADGVKALRRLKSTDAPLYLSASPDLSEAARLASKYLYSSLKPYTPKSPFA
QLLTDGFDAEQIWQQIDFQSEPLLSSLRRQIRQFEKNPEEISKLFNLVEEKKRDKEELAV
EEGESEDFKDVAMDDFDDEDDVDDDDEEEEEDDDDEEGDDGEKSEDGEEENGGVKGGLED
KFFKVNQLEEYMEADEAREYGLKKKTKRTRSKDEEEEDEEADEDEDELGFMGLDDDEDDE
NGGTESARYEDFFGSNKGIGRKKNVKSSDLSDGLGMDDDMSDDNDDNQKKKSLSTHEKEL
VKLRSTIEEMEKANLEEKAWTMQGEVTAARRPKNSALEVDLDFEHNVRPAPVITEEVTAS
LEELIQKRIVEGRFDDVQKPPSLPSRAPRETKELDDNKSKKGLAEIYEEEYVQKTGLVST
ALSFSDEQKKEATLLFKKLCLKLDALSHFHFTPKPVIEDMSVQANVPALAMEEIAPVAVS
DAAMLAPEEVFSGKGDVKEETELTQAERKRRRAKKKRKFKAESSKRTVKAAPQNTLSDDV
ERNEKS

Transcript Sequence

Gene sequence data has not been registered.